Letunic et al. (2017) Nucleic Acids Res doi: 10.1093/nar/gkx922
Letunic et al. (2020) Nucleic Acids Res doi: 10.1093/nar/gkaa937

• HOME
• SETUP
• FAQ
• ABOUT
• GLOSSARY
• WHAT'S NEW
• FEEDBACK

Fmp27_SW RNA pol II promoter Fmp27 protein domain

SMART accession number:	SM01215
Description:	Fmp27_SW is a conserved domain of a family of proteins involved in RNA polymerase II transcription initiation (PUBMED:15314641). It contains characteristic SW and GKG sequence motifs.
Interpro abstract (IPR019415):	This entry represents a conserved region within FMP27 that contains characteristic SW and GKG sequence motifs. The function of the FMP27 protein is not known. FMP27 is the product of a nuclear encoded gene but it is detected in highly purified mitochondria in high-throughput studies [ (PUBMED:16823961) ].
Family alignment:	View or CHROMA formatHMM/Web logoCLUSTALW formatMSF formatFASTA formatPIR format

There are 509 Fmp27_SW domains in 508 proteins in SMART's nrdb database.

Click on the following links for more information.

• Evolution (species in which this domain is found)

• Taxonomic distribution of proteins containing Fmp27_SW domain.

  This tree includes only several representative species. The complete taxonomic breakdown of all proteins with Fmp27_SW domain is also avaliable.

  Click on the protein counts, or double click on taxonomic names to display all proteins containing Fmp27_SW domain in the selected taxonomic class.

• Cellular role (predicted cellular role)

• Cellular role: transcription
  

• Links (links to other resources describing this domain)

• PFAM	Fmp27_SW
  INTERPRO	IPR019415

Send comments to Ivica Letunic