There were 1318212 matches in SMART for your query rna. The results are sorted based on relevance.

RPOL8c : RNA polymerase subunit 8

SMART domain

… with 12mer RNA 3gtjBacktracked RNA polymerase II complex with 13mer RNA 3gtkBacktracked RNA

RPOLCX : RNA polymerase subunit CX

SMART domain

… with 12mer RNA 3gtjBacktracked RNA polymerase II complex with 13mer RNA 3gtkBacktracked RNA

RPOLD : RNA polymerases D

SMART domain

… with 12mer RNA 3gtjBacktracked RNA polymerase II complex with 13mer RNA 3gtkBacktracked RNA

CAT_RBD : CAT RNA binding domain

SMART domain

… dimer is not disruptedupon RNA binding and several residues implicated in RNA recognition…

NUC : DNA/RNA non-specific endonuclease

SMART domain

… NUCDNA/RNA non-specific endonuclease SMART accession number:SM00477 Description: prokaryotic and…

RPOL_N : DNA-directed RNA polymerase N-terminal

SMART domain

… for substrate selection by T7 RNA polymerase 1s76T7 RNA polymerase alpha beta methylene ATP…

SpoU_sub_bind : RNA 2'-O ribose methyltransferase substrate binding

SMART domain

… viewTitle1gz023S RIBOSOMAL RNA G2251 2'O-METHYLTRANSFERASE RLMB 1ipaCRYSTAL STRUCTURE OF RNA 2'-O…

Telomerase_RBD : Telomerase ribonucleoprotein complex - RNA binding domain

SMART domain

GO function:RNA-directed DNA polymerase activity (GO:0003964) Family alignment: View or CHROMA…

Endonuclease_NS : DNA/RNA non-specific endonuclease

SMART domain

Endonuclease_NSDNA/RNA non-specific endonuclease SMART accession number:SM00892 Description: A…

Fmp27_SW : RNA pol II promoter Fmp27 protein domain

SMART domain

… a family of proteins involved in RNA polymerase II transcription initiation (PUBMED:15314641).

Fmp27_GFWDK : RNA pol II promoter Fmp27 protein domain

SMART domain

… a family of proteins involved in RNA polymerase II transcription initiation (PUBMED:15314641).

Fmp27_WPPW : RNA pol II promoter Fmp27 protein domain Provide feedback

SMART domain

… a family of proteins involved in RNA polymerase II transcription initiation (PUBMED:15314641).

RNA_pol_Rpb6 : RNA polymerase Rpb6

SMART domain

… with 12mer RNA 3gtjBacktracked RNA polymerase II complex with 13mer RNA 3gtkBacktracked RNA

RPOL9 : RNA polymerase subunit 9

SMART domain

… with 12mer RNA 3gtjBacktracked RNA polymerase II complex with 13mer RNA 3gtkBacktracked RNA

RRM_1 : RNA recognition motif

SMART domain

… supposed to bind single-stranded RNA contain one or more copies of a putative RNA-binding domain…

S4 : S4 RNA-binding domain

SMART domain

… IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT…

rADc : Ribosomal RNA adenine dimethylases

SMART domain

aeolicus KsgA in complex with RNA 3ftfCrystal structure of A. aeolicus KsgA in complex with RNA and…

PTS_2-RNA

Pfam domain

coli is not known to have a 2'-phosphorylated RNA substrate [(PUBMED:9915792),(PUBMED:11705403)].

ADEAMc : tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

SMART domain

… and double-stranded RNA adenosine deaminase (RNA-specific editase) SMART accession number:SM00552…

RPOL4c : DNA-directed RNA-polymerase II subunit

SMART domain

… 2b63Complete RNA Polymerase II-RNA inhibitor complex 2b8k12-subunit RNA Polymerase II…

RPOLA_N : RNA polymerase I subunit A N-terminus

SMART domain

… with 12mer RNA 3gtjBacktracked RNA polymerase II complex with 13mer RNA 3gtkBacktracked RNA

DSRM : Double-stranded RNA binding motif

SMART domain

RNA. 1997; 3: 1421-33 Display abstract Translation of hunchback(mat) (hb[mat]) mRNA must be…

KH : K homology RNA-binding domain

SMART domain

… Essential role for KH domains in RNA binding: impaired RNA binding by a mutation in the KH domain…

Ribosomal_L2 : Ribosomal Proteins L2, RNA binding domain

SMART domain

… Proteins L2, RNA binding domain SMART accession number:SM01383 Description: - Interpro abstract…

S1 : Ribosomal protein S1-like RNA-binding domain

SMART domain

… NusA-RNA complex 2b63Complete RNA Polymerase II-RNA inhibitor complex 2b8k12-subunit RNA

PUA : Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase

SMART domain

… Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking…

LA : Domain in the RNA-binding Lupus La protein; unknown function

SMART domain

LADomain in the RNA-binding Lupus La protein; unknown function SMART accession number:SM00715…

PUR : DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria.

SMART domain

PURDNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes…

Pumilio : Pumilio-like repeats

SMART domain

RNA. 1997; 3: 1421-33 Display abstract Translation of hunchback(mat) (hb[mat]) mRNA must be…

CSP : Cold shock protein domain

SMART domain

… termination factor bound to RNA and ADP-BeF3 3l0oStructure of RNA-free Rho transcription…

Rho_N : Rho termination factor, N-terminal domain

SMART domain

… termination factor bound to RNA and ADP-BeF3 3l0oStructure of RNA-free Rho transcription…

ZnF_C2C2 : C2C2 Zinc finger

SMART domain

… with 12mer RNA 3gtjBacktracked RNA polymerase II complex with 13mer RNA 3gtkBacktracked RNA

HAT : HAT (Half-A-TPR) repeats

SMART domain

… exhibits sequence-specific RNA binding and RNA remodeling activities, probably leading to the…

DBP10CT : DBP10CT (NUC160) domain

SMART domain

… (GO:0005634) GO function:RNA binding (GO:0003723), ATP binding (GO:0005524), ATP-dependent RNA

P68HR : P68HR (NUC004) repeat

SMART domain

Interpro abstract (IPR012587): This short region is found in two copies in RNA helicase p68 (DDX5)…

ASCH :

SMART domain

It is thought to function as an RNA-binding domain during coactivation, RNA-processing and possibly…

Ribosomal_L40e :

SMART domain

… been identified as a secondary RNA binding protein (PMID:3129699).

ZnF_U1 : U1-like zinc finger

SMART domain

… ribonucleoprotein C and other RNA-binding proteins. Interpro abstract (IPR003604): Zinc finger…

THUMP :

SMART domain

… of a 4-thiouridine synthetase - RNA complex 4kr7Crystal structure of a 4-thiouridine synthetase -…

TRCF :

SMART domain

The RNAP-DNA-RNA complex is specifically recognised by the transcription-repair-coupling factor…

RAP :

SMART domain

It is thought to be an RNA-binding domain (PUBMED:15501674). Interpro abstract (IPR013584): The…

ANTAR :

SMART domain

… regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory…

HA2 : Helicase associated domain (HA2) Add an annotation

SMART domain

It is found is a diverse set of RNA helicases. Its function is unknown, however it seems likely to…

Skp1 : Found in Skp1 protein family

SMART domain

… and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.

Ribosomal_S4 : Ribosomal protein S4/S9 N-terminal domain

SMART domain

… IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT…

MIF4G : Middle domain of eukaryotic initiation factor 4G (eIF4G)

SMART domain

… factor 4A (eIF4A) is an RNA-dependent ATPase and ATP-dependent RNA helicase that is thought to…

TUDOR : Tudor domain

SMART domain

… function present in several RNA-binding proteins. 10 copies in the Drosophila Tudor protein.

Piwi :

SMART domain

… knownsignature components of the RNA interference effector complex RNA-inducedsilencing complex…

Med12 : Transcription mediator complex subunit Med12

SMART domain

The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter…

CRS1_YhbY :

SMART domain

The name chloroplast RNA splicing and ribosome maturation (CRM) has been suggested to reflect the…