There were 294926 matches in SMART for your query rna. Results are sorted based on relevance.

RPOLCX : RNA polymerase subunit CX

SMART domain

… with 12mer rna 3gtjBacktracked rna polymerase ii complex with 13mer rna 3gtkBacktracked rna

RPOL8c : RNA polymerase subunit 8

SMART domain

… with 12mer rna 3gtjBacktracked rna polymerase ii complex with 13mer rna 3gtkBacktracked rna

RPOLD : RNA polymerases D

SMART domain

… with 12mer rna 3gtjBacktracked rna polymerase ii complex with 13mer rna 3gtkBacktracked rna

CAT_RBD : CAT RNA binding domain

SMART domain

… dimer is not disruptedupon RNA binding and several residues implicated in RNA recognition…

NUC : DNA/RNA non-specific endonuclease

SMART domain

… NUCDNA/RNA non-specific endonuclease SMART accession number:SM00477 Description: prokaryotic and…

SpoU_sub_bind : RNA 2'-O ribose methyltransferase substrate binding

SMART domain

… viewTitle1gz023s ribosomal rna g2251 2'o-methyltransferase rlmb 1ipaCrystal structure of rna 2'-o…

Telomerase_RBD : Telomerase ribonucleoprotein complex - RNA binding domain

SMART domain

GO function:RNA-directed DNA polymerase activity (GO:0003964) Family alignment: View or CHROMA…

Endonuclease_NS : DNA/RNA non-specific endonuclease

SMART domain

Endonuclease_NSDNA/RNA non-specific endonuclease SMART accession number:SM00892 Description: A…

Fmp27_SW : RNA pol II promoter Fmp27 protein domain

SMART domain

… a family of proteins involved in RNA polymerase II transcription initiation (PUBMED:15314641).

Fmp27_GFWDK : RNA pol II promoter Fmp27 protein domain

SMART domain

… a family of proteins involved in RNA polymerase II transcription initiation (PUBMED:15314641).

Fmp27_WPPW : RNA pol II promoter Fmp27 protein domain Provide feedback

SMART domain

… a family of proteins involved in RNA polymerase II transcription initiation (PUBMED:15314641).

RPOL9 : RNA polymerase subunit 9

SMART domain

… with 12mer rna 3gtjBacktracked rna polymerase ii complex with 13mer rna 3gtkBacktracked rna

RRM_1 : RNA recognition motif

SMART domain

… supposed to bind single-stranded RNA contain one or more copies of a putative RNA-binding domain…

S4 : S4 RNA-binding domain

SMART domain

… in complex with a messenger rna fragment and cognate transfer rna anticodon stem-loop bound at…

rADc : Ribosomal RNA adenine dimethylases

SMART domain

aeolicus ksga in complex with rna 3ftfCrystal structure of a. aeolicus ksga in complex with rna and…

PTS_2-RNA

Pfam domain

coli is not known to have a 2'-phosphorylated RNA substrate [(PUBMED:9915792),(PUBMED:11705403)].

ADEAMc : tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

SMART domain

… and double-stranded RNA adenosine deaminase (RNA-specific editase) SMART accession number:SM00552…

RPOL4c : DNA-directed RNA-polymerase II subunit

SMART domain

… 2b63Complete rna polymerase ii-rna inhibitor complex 2b8k12-subunit rna polymerase ii…

RPOLA_N : RNA polymerase I subunit A N-terminus

SMART domain

… with 12mer rna 3gtjBacktracked rna polymerase ii complex with 13mer rna 3gtkBacktracked rna

DSRM : Double-stranded RNA binding motif

SMART domain

RNA. 1997; 3: 1421-33 Display abstract Translation of hunchback(mat) (hb[mat]) mRNA must be…

KH : K homology RNA-binding domain

SMART domain

… Essential role for KH domains in RNA binding: impaired RNA binding by a mutation in the KH domain…

S1 : Ribosomal protein S1-like RNA-binding domain

SMART domain

… nusa-rna complex 2b63Complete rna polymerase ii-rna inhibitor complex 2b8k12-subunit rna

LA : Domain in the RNA-binding Lupus La protein; unknown function

SMART domain

LADomain in the RNA-binding Lupus La protein; unknown function SMART accession number:SM00715…

PUA : Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase

SMART domain

… synthase trub and its rna complex: rna-protein recognition through a combination of rigid docking…

PUR : DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria.

SMART domain

PURDNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes…

Pumilio : Pumilio-like repeats

SMART domain

RNA. 1997; 3: 1421-33 Display abstract Translation of hunchback(mat) (hb[mat]) mRNA must be…

CSP : Cold shock protein domain

SMART domain

… number:SM00357 Description: RNA-binding domain that functions as a RNA-chaperone in bacteria and…

Rho_N : Rho termination factor, N-terminal domain

SMART domain

… suggesting that the strong RNA-binding sites ofRho may arise from pairing of RNA-binding modules…

ZnF_C2C2 : C2C2 Zinc finger

SMART domain

… with 12mer rna 3gtjBacktracked rna polymerase ii complex with 13mer rna 3gtkBacktracked rna

HAT : HAT (Half-A-TPR) repeats

SMART domain

… Description: Present in several RNA-binding proteins. Structurally and sequentially thought to be…

DBP10CT : DBP10CT (NUC160) domain

SMART domain

… Dbp10p subfamily of hypothetical RNA helicases ((PUBMED:15112237)).

ASCH :

SMART domain

It is thought to function as an RNA-binding domain during coactivation, RNA-processing and possibly…

ZnF_U1 : U1-like zinc finger

SMART domain

… ribonucleoprotein C and other RNA-binding proteins. Interpro abstract (IPR003604): Zinc finger…

THUMP :

SMART domain

It is predicted that this domain is an RNA-binding domain The THUMP domain probably functions by…

TRCF :

SMART domain

The RNAP-DNA-RNA complex is specifically recognised by the transcription-repair-coupling factor…

RAP :

SMART domain

It is thought to be an RNA-binding domain (PUBMED:15501674). Interpro abstract (IPR013584): The…

ANTAR :

SMART domain

… regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory…

HA2 : Helicase associated domain (HA2) Add an annotation

SMART domain

It is found is a diverse set of RNA helicases. Its function is unknown, however it seems likely to…

Skp1 : Found in Skp1 protein family

SMART domain

… and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.

MIF4G : Middle domain of eukaryotic initiation factor 4G (eIF4G)

SMART domain

… factor 4A (eIF4A) is an RNA-dependent ATPase and ATP-dependent RNA helicase that is thought to…

TUDOR : Tudor domain

SMART domain

… function present in several RNA-binding proteins. 10 copies in the Drosophila Tudor protein.

Piwi :

SMART domain

… knownsignature components of the RNA interference effector complex RNA-inducedsilencing complex…

Med12 : Transcription mediator complex subunit Med12

SMART domain

… interaction with Gli3 within the RNA polymerase II transcriptional Mediator.

CRS1_YhbY :

SMART domain

The name chloroplast RNA splicing and ribosome maturation (CRM) has been suggested to reflect the…

CarD_TRCF : CarD-like/TRCF domain

SMART domain

TRCF displaces RNA polymerase stalled at a lesion, binds to the damage recognition protein UvrA…

SRP54 : SRP54-type protein, GTPase domain

SMART domain

The RNA component catalyses the interaction of SRP with its SR receptor [(PUBMED:17507650)].

CTD : Spt5 C-terminal nonapeptide repeat binding Spt4

SMART domain

… transcription elongation by RNA polymerase II. The complex may be involved in pre-mRNA processing…

SRP54_N : SRP54-type protein, helical bundle domain

SMART domain

… the M-domain that binds the 7s RNA and also binds the signal sequence.

IRF-3 : Interferon-regulatory factor 3

SMART domain

… up the DRAF1 (double-stranded RNA-activated factor 1). Viral dsRNA produced during viral…

HABP4_PAI-RBP1 : Hyaluronan / mRNA binding family

SMART domain

… has also been observed to bind RNA, but with a lower affinity than that for hyaluronan…