There were 1318212 matches in SMART for your query rna. The results are sorted based on relevance.
Ribosomal_TL5_CPfam domain… of protein L25 uncomplexed with RNA shows two significantly disordered loops and a closed… |  |
YhdKPfam domain… class of the sigma 70 subunit of RNA polymerase. Most members are known to regulate gene… |  |
Med27Pfam domain… the transcriptional activity of RNA polymerase II but it would appear that each of the four… |  |
Med13_NPfam domain… the transcriptional activity of RNA polymerase II but it would appear that each of the four… |  |
ParD_antitoxinPfam domain… function of lying across the RNA-binding groove of the toxin dimer and inactivating the… |  |
UPF0066Pfam domain… known as TsaA or TrmO) is a RNA methyltransferase responsible for N6-methylation of… |  |
Cucumo_coatPfam domainCucumoviruses are tripartite RNA plant viruses believed to share a close evolutionary relationship… |  |
zf-nanosPfam domainNanos is a highly conserved RNA-binding protein in higher eukaryotes and functions as a key… |  |
ptaRNA1_toxinPfam domain… by a short-lived small RNA. The plasmid-encoded module prevents the growth of plasmid-free… |  |
Birna_VP4Pfam domain… bi- segmented double-stranded RNA genome (segments A and B). Segment A encodes two overlapping… |  |
OTT_1508_deamPfam domain… as nucleic acid (either DNA or RNA) deaminases. Among eukaryotes, some fungi show… |  |
Ribosomal_L25pPfam domainRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA [(PUBMED:9799245)… |  |
ArgoMidPfam domain… guide uniquely in the proper position observed in all Argonaute-RNA complexes [(PUBMED:23746446)]. |  |
SF1-HHPfam domain… of the ternary SF1-U2AF65-RNA complex [(PUBMED:23175611)]. This domain contains a highly… |  |
PIN_6Pfam domain… in processing of 18S ribosomal RNA [(PUBMED:19706509)]. In prokaryotes, they are the toxic… |  |
SH2_2Pfam domain… repeat domain (CTD) of RNA polymerase II [(PUBMED:20926372)]. |  |
SAM : Sterile alpha motif.SMART domainRNA. 1997; 3: 1421-33 Display abstract Translation of hunchback(mat) (hb[mat]) mRNA must be… |  |
FDF :SMART domainThe identification of these RNA-bindingdomains may throw light on the emergence of… |  |
PolyA : C-terminal domain of Poly(A)-binding protein. Present also in Drosophila hyperplastics discs protein.SMART domainRBDs 1 plus 2 exhibit RNA affinity and selectivity equal to the wild-type (WT) protein. |  |
zf-CCHCPfam domain… are now recognised to bind DNA, RNA, protein and/or lipid substrates [(PUBMED:10529348)… |  |
CSDPfam domain… [(PUBMED:1614871)] to the RNP-1 RNA-binding motif. CSPs include the major cold-shock proteins… |  |
Plus-3Pfam domain… histone H3 methylation, RNA polymerase II carboxy-terminal domain (CTD) Ser2 phosphorylation, and… |  |
TFIIAPfam domain… complex along with RNA polymerase II, the TATA-box-binding protein (TBP) and TBP-associated… |  |
tRNA_synt_1c_R2Pfam domain… acid to its cognate transfer RNA molecule in a highly specific two-step reaction… |  |
tRNA_synt_1c_R1Pfam domain… acid to its cognate transfer RNA molecule in a highly specific two-step reaction… |  |
PRDPfam domain… domain that binds to either RNA (CAT-RBD for antiterminators, IPR004341) or DNA (for activators)… |  |
CnrYPfam domain… subunits of bacterial RNA polymerase (RNAP) that play critical roles in transcription initiation… |  |
Brix :SMART domain… reported pre-60S complexes in RNA and protein composition.We describe a multistep pathway of 60S… |  |
RL11 : Ribosomal protein L11/L12SMART domainIn contrast to the L11 RNA-binding domain studied previously, S4 Delta41 shows no fast local… |  |
SAP : Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisationSMART domain… in transcription, DNA repair, RNA processing or apoptotic chromatin degradation. |  |
AXH : domain in Ataxins and HMG containing proteinsSMART domain… and has been implicated in RNA binding and self-association. The AXH domain is dimeric and… |  |
CRA : CT11-RanBPMSMART domain… of protein-protein and protein-RNA interactions. Most of the currently known protein partners of… |  |
Kin17_mid : Domain of Kin17 curved DNA-binding proteinSMART domain… residue region of the Kin17 DNA/RNA-binding proteins. The N-terminal region of Kin17 contains a… |  |
R3H : Putative single-stranded nucleic acids-binding domainSMART domain… AAA domain or with various DNA/RNA binding domains like DSRM, KH, G-patch, PHD, DEAD box, or RRM. |  |
SWAP : Suppressor-of-White-APricot splicing regulatorSMART domainGO process:RNA processing (GO:0006396) GO function:RNA binding (GO:0003723) Family alignment: View… |  |
TFS2N : Domain in the N-terminus of transcription elongation factor S-II (and elsewhere)SMART domain… intrinsic nuclease activity of RNA polymerase (Pol) II, past template-encoded pause sites. |  |
Peptidase_A6Pfam domain… within which is packaged two RNA stands, RNA1 and RNA2.Nodavirus coat precursor endopeptidase… |  |
TF_Zn_RibbonPfam domain… are now recognised to bind DNA, RNA, protein and/or lipid substrates [(PUBMED:10529348)… |  |
DUF1866 :SMART domain… 2 2dnrSolution structure of RNA binding domain in Synaptojanin 1 Links (links to other resources… |  |
Jag_N :SMART domain… structure of a probable RNA-binding protein from Clostridium symbiosum ATCC 14940 Links (links to… |  |
NGN : In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.SMART domain… Display abstract The passage of RNA polymerase II across eukaryotic genes is impeded by the… |  |
PKS_MT : Methyltransferase in polyketide synthase (PKS) enzymes.SMART domain… (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory… |  |
Ribosomal_S13_N : Ribosomal S13/S15 N-terminal domainSMART domain… mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance… |  |
Ribosomal_S27 : Ribosomal protein S27aSMART domain… mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance… |  |
TFIIE : Transcription initiation factor IIESMART domain… upon transcription initiation by RNA polymerase II. The approximately 120-residue central core… |  |
Med25Pfam domain… the transcriptional activity of RNA polymerase II, but it would appear that each of the four… |  |
Ribosomal_S17Pfam domain… to the 5' end of 16S ribosomal RNA in Escherichia coli (primary rRNA binding protein), and is… |  |
TropomyosinPfam domain… splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between… |  |
Alpha_E2_glycopPfam domainAlphaviruses are enveloped RNA viruses that use arthropods such as mosquitoes for transmission to… |  |
Luteo_coatPfam domain… virus capsid proteins, is highly basic. These regions may be involved in protein-RNA interaction. |  |